developmental biology
Circadian Clock Model Visualisation Tools
Circadian Clock Model Visualisation Tools - Moving 2/3D plots and network diagram of an ode model of the circadian clock gene network more>>
A dynamic moving network diagram of the model can also be displayed. In this case, the blocks representing the model species and the arrows representing species interactions vary in size periodically, corresponding to the varying species levels as the model oscillates. A corresponding time series plot appears alongside the network.
GUI controls allow the user to alter model parameters during a simulation in order to immediately observe the effect on model behavior. It is possible for the user to record their own avi files of simulations.
This program should prove particularly useful in the teaching of circadian biology, but should also be useful for gaining a greater understanding of model dynamics and the effect of perturbations.
Requirements: MATLAB Release: R14SP
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